Datalad for Hirnis
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Change log
Acknowledgments
Introduction
Concepts
Basic workflow
Basic usage examples
Specification
Toolbox
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Hirni commands
Python module reference
Datalad for Hirnis
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DataLad extension module for neuroimaging studies
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DataLad extension module for neuroimaging studies
¶
Change log
Acknowledgments
Overview
¶
Introduction
What is datalad-hirni?
Is it free and open source?
Where do I get it?
What now?
Concepts
One thing to bind them all
Trust automation
Conversion
Don’t trust automation
Basic workflow
Build your study dataset
Import DICOM files
Add arbitrary data
Convert your dataset
Basic usage examples
An example study
Example queries
Demo script to bootstrap a DICOM database from scan tarballs
Demo: Conversion to BIDS
Demo: A Reproducible GLM Analysis
Details
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Specification
Overview
Structure
Toolbox
Customization
Configuration
Procedures
Rules
Command manuals
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Hirni commands
datalad-hirni-import-dcm
datalad-hirni-dicom2spec
datalad-hirni-spec2bids
datalad-hirni-spec4anything
Python API
¶
Python module reference
Indices and tables
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Index
Module Index
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