Command line reference

Main command

• datalad: Main command entrypoint

Core commands

A minimal set of commands that cover essential functionality. Core commands receive special scrutiny with regard API composition and (breaking) changes.

Local operation

• datalad create: Create a new dataset
• datalad save: Save the state of a dataset
• datalad run: Run a shell command and record its impact on a dataset
• datalad status: Report on the state of dataset content
• datalad diff: Report differences between two states of a dataset

Distributed operation

• datalad clone: Obtain a dataset (sibling) from another location
• datalad push: Push updates/data to a dataset sibling

Extended set of functionality

Dataset operations

• datalad add-readme: Add information on DataLad dataset to a README
• datalad addurls: Update dataset content from a list of URLs
• datalad copy-file: Copy file identity and availability from one dataset to another
• datalad drop: Drop datasets or dataset components
• datalad get: Obtain any dataset content
• datalad install: Install a dataset from a (remote) source
• datalad no-annex: Configure a dataset to never put file content into an annex
• datalad remove: Unlink components from a dataset
• datalad subdatasets: Query and manipulate subdataset records of a dataset
• datalad unlock: Make dataset file content editable

Dataset siblings and 3rd-party platform support

• datalad siblings: Query and manipulate sibling configuration of a dataset
• datalad create-sibling: Create a sibling on an SSH-accessible machine
• datalad create-sibling-github: Create a sibling on GitHub
• datalad create-sibling-gitlab: Create a sibling on GitLab
• datalad create-sibling-gogs: Create a sibling on GOGS
• datalad create-sibling-gitea: Create a sibling on Gitea
• datalad create-sibling-gin: Create a sibling on GIN (with content hosting)
• datalad create-sibling-ria: Create a sibling in a RIA store
• datalad export-archive: Export dataset content as a TAR/ZIP archive
• datalad export-archive-ora: Export a local dataset annex for the ORA remote
• datalad export-to-figshare: Export dataset content as a ZIP archive to figshare
• datalad update: Obtain and incorporate updates from dataset siblings

Reproducible execution

Extending the functionality of the core run command.

• datalad rerun: Re-execute previous datalad-run commands
• datalad run-procedure: Run prepared procedures (DataLad scripts) on a dataset

Metadata handling

• datalad search: Query metadata of a dataset
• datalad metadata: Report known metadata on particular datasets or files
• datalad aggregate-metadata: Assemble metadata from datasets for later query
• datalad extract-metadata: Run metadata extractor on a dataset or file

Helpers and support utilities

• datalad add-archive-content: Extract and add the content of an archive to a dataset
• datalad clean: Remove temporary left-overs of DataLad operations
• datalad check-dates: Scan a dataset for dates and timestamps
• datalad configuration: Get and set configuration
• datalad create-test-dataset: Test helper
• datalad download-url: Download helper with support for DataLad's credential system
• datalad foreach-dataset: Run a command or Python code on the dataset and/or each of its sub-datasets
• datalad sshrun: Remote command execution using DataLad's connection management
• datalad shell-completion: Helper to support command completion
• datalad wtf: Report on a DataLad installation and its configuration

Deprecated commands

• datalad uninstall: Drop subdatasets